// GATK4 Germline Variant Caller
digraph GATK4_GermlineVariantCaller {
	node [shape=record]
	base_recalibrator [label="base_recalibrator (GATK4: Base Recalibrator)"]
	apply_bqsr [label="apply_bqsr (GATK4: Apply base quality score recalibration)"]
	haplotype_caller [label="haplotype_caller (GATK4: Haplotype Caller)"]
	splitnormalisevcf [label="splitnormalisevcf (Split Multiple Alleles and Normalise Vcf)"]
	addbamstats [label="addbamstats (Annotate Bam Stats to Germline Vcf Workflow)" color=grey80 style=filled]
	base_recalibrator -> apply_bqsr
	apply_bqsr -> haplotype_caller
	haplotype_caller -> splitnormalisevcf
	splitnormalisevcf -> addbamstats
}
